SCIMP: Scan for Imperfect Phylogenies

This webserver finds unrooted maximum parsimony phylogeny and can scan any region of the genome to detect large imperfection (recurrent mutations or recombinations).

Input: Manually enter SNPs below Use HapMap data Enter SNP data. Examples: small, larger, harder Enter HapMap SNP information. CEU YRI Chromosome Position Genotyped SNP Number Chromosome (1-21): Start (numeric): End (numeric): Analysis: Scan     window size:     display all phylogenies (big!)? Imperfection (Maximum Parsimony)     display union of all maximum parsimony tree edges (slower)?	—> Instructions —> People —> Algorithms —> Contact —> To do —> Downloads
Please email us if you encounter bugs or have suggestions This material is based upon work supported by the National Science Foundation under Grant No. 0612099. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Template adapted from Free Site Templates